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Gervaise Henry authored79f7c244
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CHANGELOG.md 1.14 KiB
v0.0.3 (in development)
User Facing
- TPM table:
- Add Ensembl Gene ID
- Rename columns: GENCODE_Gene_Symbol, Ensembl_GeneID, NCBI_GeneID
- MultiQC output custom talbes (html+JSON):
- Run table: Session ID and Pipeline Version
- Reference Table: Species, Genome Reference Consortium Build, Genome Reference Consortium Patch, GENCODE Annotation Release (ouputs both human and mouse versions)
Background
- Add GeneSymbol/EnsemblID/EntrezID translation files to references
Known Bugs
- outputBag does not contain fetch for processed data
- Does not include automatic data upload
v0.0.2
User Facing
- Output:
- inputBag
- outputBag
- Remove gene details from tpm table
- Add EntrezID translation to tpm table (from version specific reference)
Background
- Add GeneSymbol/EnsemblID/EntrezID translation files to references
Known Bugs
- outputBag does not contain fetch for processed data
- Does not include automatic data upload
v0.0.1
INITIAL BETA VERSION
Does not include automatic data upload
This version is for initial upload of test data to GUDMAP/RBK data-hub for internal integration