Merge requests · Astrocyte

Resolve "MultiQC error"

cellranger_count!56 · created Aug 13, 2019 by Jeremy Mathews v1.2.0
enhancement
updated Aug 13, 2019
Update Checkdesign to take all SR*, ER*, and DR*

sra_pipeline!33 · created Aug 08, 2019 by Jeremy Mathews
updated Aug 12, 2019
Resolve "annotate peaks" 3 of 3 checklist items completed

chipseq_analysis!57 · created Aug 05, 2019 by Jeremy Mathews 1.1.1 master
enhancement
- Merged
- 2
updated Aug 12, 2019
Add Check Design File

sra_pipeline!32 · created Aug 07, 2019 by Jeremy Mathews
updated Aug 07, 2019
Remove md changes from CI

cellranger_count!55 · created Aug 05, 2019 by Jeremy Mathews
updated Aug 05, 2019
Resolve "Fix CountDesign"

cellranger_mkfastq!44 · created Aug 05, 2019 by Jeremy Mathews v1.3.0
bug
updated Aug 05, 2019
Output path

sra_pipeline!31 · created Aug 02, 2019 by Jeremy Mathews
updated Aug 02, 2019
Fix Astrocyte label

sra_pipeline!30 · created Aug 01, 2019 by Jeremy Mathews
updated Aug 01, 2019
Resolve "Exclude changes in *.md for CI"

cellranger_mkfastq!43 · created Jul 31, 2019 by Jeremy Mathews
enhancement
- Merged
updated Jul 31, 2019
Resolve "Add cellranger v 3.1.0"

cellranger_count!54 · created Jul 31, 2019 by Jeremy Mathews v1.2.0
enhancement
updated Jul 31, 2019
Resolve "Change to cellranger v 3.1.0"

cellranger_mkfastq!42 · created Jul 31, 2019 by Jeremy Mathews v1.3.0
enhancement
updated Jul 31, 2019
Resolve "Single control or experiment fails at call peaks macs" 4 of 4 checklist items completed

chipseq_analysis!54 · created Jul 12, 2019 by Jeremy Mathews 1.0.6 master
enhancement
- Merged
- 2
updated Jul 30, 2019
Develop

cellranger_count!53 · created Jul 24, 2019 by Gervaise Henry v1.1.0 master
updated Jul 24, 2019
Develop

cellranger_mkfastq!41 · created Jul 24, 2019 by Gervaise Henry v1.2.0 master
updated Jul 24, 2019
Resolve "Test for kitVersion=3 and version=2.1.1 and exit if true"

cellranger_count!52 · created Jul 23, 2019 by Jeremy Mathews v1.1.0
enhancement
updated Jul 23, 2019
Resolve "Add pytest to CI"

cellranger_count!51 · created Jul 23, 2019 by Gervaise Henry v1.1.0
To Do documentation
updated Jul 23, 2019
Update test_generate_software_versions.py

chipseq_analysis!56 · created Jul 19, 2019 by Jeremy Mathews master
updated Jul 22, 2019
Resolve "Add pytest to CI"

cellranger_mkfastq!40 · created Jul 19, 2019 by Jeremy Mathews v1.2.0
To Do documentation
updated Jul 22, 2019
Resolve "add plotProfile" 5 of 5 checklist items completed

chipseq_analysis!55 · created Jul 18, 2019 by Jeremy Mathews 1.1.1 master
enhancement
- Merged
- 4
updated Jul 19, 2019
Added second configuration file for Astrocyte.

sra_pipeline!29 · created Jul 18, 2019 by Jonathan Gesell Astrocyte Functionality
testing
updated Jul 18, 2019