Merge requests · Astrocyte

Resolve "Update to Singularity Image 2.0.0 compatability."

sra_pipeline!48 · created Feb 05, 2020 by Jonathan Gesell Singularity 2.0.0 Compatability
Updates
updated Feb 05, 2020
Remove artifacts.

chipseq_analysis!61 · created Jan 28, 2020 by Venkat Malladi 1.1.1 master
bug
- Merged
updated Jan 28, 2020
Update to 2.0.0 compliance, and updated config file to be more universal.

sra_pipeline!47 · created Jan 16, 2020 by Jonathan Gesell Singularity 2.0.0 Compatability
Updates
- Merged
updated Jan 16, 2020
Update README.md

sra_pipeline!46 · created Jan 16, 2020 by Jonathan Gesell
- Merged
updated Jan 16, 2020
Update index.md for Astrocyte Functionality.

sra_pipeline!45 · created Jan 15, 2020 by Jonathan Gesell Astrocyte Functionality
Updates
updated Jan 15, 2020
Update README.md for clarification of use on Astrocyte.

sra_pipeline!44 · created Jan 15, 2020 by Jonathan Gesell Astrocyte Functionality
Updates
updated Jan 15, 2020
Fix documentationn for choosing only fastq files.

rnaseq!9 · created Jan 07, 2020 by Venkat Malladi
updated Jan 07, 2020
Resolve "Fix BioHPC config"

atacseq_analysis!14 · created Jan 07, 2020 by Holly Ruess Version 2.0 master
enhancment
updated Jan 07, 2020
Resolve "fix consensus peaks"

atacseq_analysis!13 · created Jan 06, 2020 by Holly Ruess Version 2.0 master
enhancment
updated Jan 07, 2020
Develop

cellranger_mkfastq!59 · created Jan 06, 2020 by Gervaise Henry v2.1.5 master
updated Jan 06, 2020
Resolve "Fix Pool and Pseudoreps"

atacseq_analysis!12 · created Jan 02, 2020 by Holly Ruess Version 2.0 master
enhancment
updated Jan 03, 2020
39 aws

cellranger_mkfastq!57 · created Dec 31, 2019 by Gervaise Henry v2.1.5
updated Dec 31, 2019
Resolve "Fix Convert Reads"

atacseq_analysis!11 · created Dec 20, 2019 by Holly Ruess Version 2.0 master
enhancment
updated Dec 27, 2019
Resolve "Fix Experiment QC"

atacseq_analysis!10 · created Dec 19, 2019 by Holly Ruess Version 2.0 master
enhancment
updated Dec 20, 2019
fix filter reads

atacseq_analysis!9 · created Dec 18, 2019 by Holly Ruess Version 2.0 master
enhancment
updated Dec 18, 2019
Resolve "Fix Align Reads"

atacseq_analysis!8 · created Dec 16, 2019 by Holly Ruess Version 2.0 master
enhancment
updated Dec 16, 2019
Resolve "Fix Trim Reads"

atacseq_analysis!7 · created Dec 11, 2019 by Venkat Malladi Version 2.0 master
enhancment
updated Dec 11, 2019
Resolve "update check design file"

atacseq_analysis!3 · created Dec 09, 2019 by Holly Ruess Version 2.0 master
enhancment
- Merged
- 2
updated Dec 09, 2019
Resolve "Remove unnecessary columns from design file"

atacseq_analysis!2 · created Dec 04, 2019 by Holly Ruess Version 2.0 master
- Merged
- 3
updated Dec 04, 2019
Resolve 37-Design File Check

cellranger_count!58 · created Nov 07, 2019 by Jeremy Mathews v2.1.1
bug
updated Nov 07, 2019