Merge requests · Astrocyte

Resolve "Paired-end Diffbind peaks gives different answer" after changing random 2 of 2 checklist items completed

chipseq_analysis!69 · created Apr 17, 2020 by Venkat Malladi 1.1.0 master
Test bug
updated Apr 20, 2020
Drop indev in version, finish adding aws details

cellranger_count!65 · created Apr 16, 2020 by Gervaise Henry
updated Apr 16, 2020
Master

cellranger_count!64 · created Apr 16, 2020 by Gervaise Henry
updated Apr 16, 2020
Ci merge test

chipseq_analysis!68 · created Mar 28, 2020 by Venkat Malladi master
- Merged
- 6
updated Apr 16, 2020
Develop 6 of 7 checklist items completed

cellranger_count!63 · created Apr 15, 2020 by Gervaise Henry master
updated Apr 15, 2020
Resolve "Containerize"

cellranger_count!62 · created Apr 15, 2020 by Gervaise Henry v2.1.1
Doing enhancement
updated Apr 15, 2020
Resolve "Update params to current standards"

cellranger_count!61 · created Apr 14, 2020 by Gervaise Henry v2.1.1
Doing enhancement
updated Apr 15, 2020
Resolve "Add 3':5' param"

cellranger_count!60 · created Apr 14, 2020 by Gervaise Henry v2.1.1
Doing critical enhancement
- Merged
updated Apr 14, 2020
Resolve "Add percent of reads - mitochondria" 5 of 5 checklist items completed

atacseq_analysis!16 · created Mar 24, 2020 by Holly Ruess Version 2.0 master
enhancment
- Merged
- 1
updated Mar 24, 2020
Resolve "Single Rep Pool and Pseudo" 3 of 3 checklist items completed

chipseq_analysis!63 · created Feb 12, 2020 by Venkat Malladi 1.1.0 master
bug
- Merged
- 3
updated Mar 24, 2020
Update to test with new astrocyte runner. 0 of 4 checklist items completed

chipseq_analysis!66 · created Mar 19, 2020 by Venkat Malladi 1.1.0 master
- Merged
- 1
updated Mar 21, 2020
Resolve "Python Version not in Software Version" 3 of 3 checklist items completed

chipseq_analysis!64 · created Feb 12, 2020 by Venkat Malladi 1.1.1 master
bug
updated Mar 02, 2020
Resolve "callPeaksMACS exits when data is bad" 3 of 3 checklist items completed

chipseq_analysis!62 · created Feb 12, 2020 by Venkat Malladi 1.1.1 master
bug
updated Feb 29, 2020
Resolve "Generate MultiQC report"

atacseq_analysis!15 · created Feb 25, 2020 by Holly Ruess Version 2.0 master
enhancment
updated Feb 25, 2020
Resolve "BUG: thread error on Astrocyte"

cellranger_count!59 · created Feb 21, 2020 by Gervaise Henry v2.1.1
Doing bug confirmed critical
updated Feb 21, 2020
Changed singularity container to allow for rendering of references. 3 of 3 checklist items completed

chipseq_analysis!65 · created Feb 12, 2020 by Venkat Malladi 1.1.1 master
bug
updated Feb 18, 2020
Update index.md to match ReadMe.md

sra_pipeline!53 · created Feb 07, 2020 by Jonathan Gesell
Bug fixes
updated Feb 07, 2020
Update README.md

sra_pipeline!52 · created Feb 06, 2020 by Jonathan Gesell
updated Feb 06, 2020
Corrected typos in ReadMe.md

sra_pipeline!51 · created Feb 06, 2020 by Jonathan Gesell
Updates error correction
updated Feb 06, 2020
Resolve "Update to Singularity Image 2.0.0 compatability."

sra_pipeline!50 · created Feb 06, 2020 by Jonathan Gesell Singularity 2.0.0 Compatability
Updates
updated Feb 06, 2020