Merge requests · Astrocyte

Update configuration for queue to fix large number of reads. 2 of 2 checklist items completed

atacseq_analysis!30 · created Jul 28, 2020 by Venkat Malladi
bug critical
updated Jul 29, 2020
Cellranger 4.0.0 ref 2020 a

cellranger_mkfastq!70 · created Jul 22, 2020 by Gervaise Henry containerize
updated Jul 22, 2020
Fix local process ulimit set

cellranger_mkfastq!69 · created Jun 21, 2020 by Gervaise Henry v2.1.5 master
updated Jun 21, 2020
Fix multi sample, local ulimit set, v2.1.1

cellranger_count!74 · created Jun 21, 2020 by Gervaise Henry v2.1.1 master
updated Jun 21, 2020
Develop

cellranger_count!73 · created Jun 21, 2020 by Gervaise Henry v2.1.1 master
updated Jun 21, 2020
Update configs folder name 0 of 7 checklist items completed

cellranger_count!72 · created Jun 21, 2020 by Gervaise Henry v2.1.1
updated Jun 21, 2020
De containerize 2 of 7 checklist items completed

cellranger_count!71 · created Jun 21, 2020 by Gervaise Henry v2.1.1
updated Jun 21, 2020
Develop

cellranger_mkfastq!68 · created Jun 21, 2020 by Gervaise Henry v2.1.5 master
updated Jun 21, 2020
Revert "Use base mask I1 = 8n, version 2.1.3"

cellranger_mkfastq!67 · created Jun 21, 2020 by Gervaise Henry v2.1.5
updated Jun 21, 2020
Add in pipelinetracking. 0 of 1 checklist item completed

chipseq_analysis!70 · created Jun 21, 2020 by Venkat Malladi
- Merged
- 1
updated Jun 23, 2020
Develop

cellranger_mkfastq!66 · created Jun 20, 2020 by Gervaise Henry v2.1.5 master
updated Jun 20, 2020
Develop

cellranger_mkfastq!65 · created Jun 20, 2020 by Gervaise Henry v2.1.5 master
updated Jun 20, 2020
mkfastq run on high power node, version 2.1.1

cellranger_mkfastq!64 · created Jun 20, 2020 by Gervaise Henry v2.1.5 master
updated Jun 20, 2020
Develop 7 of 8 checklist items completed

cellranger_mkfastq!63 · created Jun 20, 2020 by Gervaise Henry v2.1.5 master
updated Jun 20, 2020
De containerize 3 of 8 checklist items completed

cellranger_mkfastq!62 · created Jun 20, 2020 by Gervaise Henry v2.1.5
updated Jun 20, 2020
Update 6 of 8 checklist items completed

cellranger_mkfastq!61 · created Jun 20, 2020 by Gervaise Henry v2.1.5
updated Jun 20, 2020
Master

cellranger_mkfastq!60 · created Jun 20, 2020 by Gervaise Henry
updated Jun 20, 2020
Resolve "Astrocyte fixes" 4 of 4 checklist items completed

atacseq_analysis!28 · created Jun 19, 2020 by Venkat Malladi master
updated Jun 21, 2020
"Update doi in Readme" 3 of 7 checklist items completed

sra_pipeline!62 · created Jun 17, 2020 by Venkat Malladi
updated Aug 15, 2020
Update CHANGELOG.md with new v1.1.0 change information.

sra_pipeline!60 · created Jun 17, 2020 by Jonathan Gesell
Updates
- Closed
updated Jun 17, 2020