Merge requests · Astrocyte

Resolve "Add pytest to CI"

cellranger_count!49 · created Jul 22, 2019 by Jeremy Mathews v1.1.0
To Do documentation
- Closed
updated Jul 23, 2019
Update gitignore with nextflow and update software reference test

chipseq_analysis!51 · created Jul 10, 2019 by Jeremy Mathews 1.0.6 master
enhancement
- Closed
updated Jul 10, 2019
5 correct config

sra_pipeline!22 · created Jul 03, 2019 by Jonathan Gesell
Bug fixes
- Closed
updated Jul 05, 2019
Patch 1

sra_pipeline!21 · created Jul 03, 2019 by Jonathan Gesell 5_correctConfig
- Closed
updated Jul 03, 2019
5 correct config

sra_pipeline!19 · created Jul 01, 2019 by Jonathan Gesell
- Closed
updated Jul 01, 2019
5 correct config

sra_pipeline!18 · created Jul 01, 2019 by Jonathan Gesell
Bug fixes
- Closed
updated Jul 01, 2019
Resolve "Add MultiQC"

cellranger_count!46 · created Jun 28, 2019 by Gervaise Henry v1.1.0
To Do enhancement
- Closed
updated Jun 28, 2019
Add MultiQC to output. Add version and reference material. fix README

cellranger_count!44 · created Jun 27, 2019 by Jeremy Mathews v1.1.0
To Do enhancement
- Closed
updated Jun 28, 2019
Add References Reort and Markdown file; Update README file

cellranger_mkfastq!36 · created Jun 25, 2019 by Jeremy Mathews v1.2.0
To Do enhancement
- Closed
updated Jun 26, 2019
Develop

tcga_shiny!20 · created May 24, 2019 by Gervaise Henry 1.0.1 master
- Closed
updated May 24, 2019
Resolve "Move untarBCL code into a bash script"

cellranger_mkfastq!34 · created May 24, 2019 by Jeremy Mathews v1.2.0
To Do enhancement
- Closed
updated May 24, 2019
Move untarBCl to Script

cellranger_mkfastq!33 · created May 24, 2019 by Jeremy Mathews v1.2.0
To Do enhancement
- Closed
updated May 24, 2019
Folder and File Check issue #25

cellranger_count!42 · created May 23, 2019 by Jeremy Mathews v1.1.0
enhancement
- Closed
updated May 24, 2019
Resolve "Add in Astrocyte Support"

sra_pipeline!9 · created May 22, 2019 by Jonathan Gesell
error correction testing
- Closed
updated May 23, 2019
Update test_fastqc.py

sra_pipeline!10 · created May 23, 2019 by Jonathan Gesell
- Closed
updated May 23, 2019
Resolve "Add in Astrocyte Support"

sra_pipeline!7 · created May 17, 2019 by Jonathan Gesell
error correction
- Closed
updated May 22, 2019
Resolve "Add error checking for filename/folder names"

cellranger_mkfastq!31 · created May 20, 2019 by Jeremy Mathews v1.2.0
Doing enhancement
- Closed
updated May 21, 2019
Update design_example.txt

chipseq_analysis!36 · created May 02, 2019 by Spencer Barnes master
- Closed
updated May 02, 2019
WIP: Resolve "Update documentation"

chipseq_analysis!34 · created Apr 26, 2019 by Holly Ruess 1.0.0 master
documentation enhancement
- Closed
updated Apr 29, 2019
WIP: Resolve "Update documentation"

chipseq_analysis!33 · created Apr 26, 2019 by Holly Ruess 1.0.0 master
documentation enhancement
- Closed
updated Apr 29, 2019