Merge requests · BICF

Resolve "Test for kitVersion=3 and version=2.1.1 and exit if true"

BICF/Astrocyte/cellranger_count!52 · created Jul 23, 2019 by Jeremy Mathews v1.1.0
enhancement
updated Jul 23, 2019
Resolve "Add pytest to CI"

BICF/Astrocyte/cellranger_count!51 · created Jul 23, 2019 by Gervaise Henry v1.1.0
To Do documentation
updated Jul 23, 2019
Update test_generate_software_versions.py

BICF/Astrocyte/chipseq_analysis!56 · created Jul 19, 2019 by Jeremy Mathews master
updated Jul 22, 2019
Resolve "Add pytest to CI"

BICF/Astrocyte/cellranger_mkfastq!40 · created Jul 19, 2019 by Jeremy Mathews v1.2.0
To Do documentation
updated Jul 22, 2019
Resolve "add plotProfile" 5 of 5 checklist items completed

BICF/Astrocyte/chipseq_analysis!55 · created Jul 18, 2019 by Jeremy Mathews 1.1.1 master
enhancement
- Merged
- 4
updated Jul 19, 2019
Added second configuration file for Astrocyte.

BICF/Astrocyte/sra_pipeline!29 · created Jul 18, 2019 by Jonathan Gesell Astrocyte Functionality
testing
updated Jul 18, 2019
Update references.md

BICF/Astrocyte/chipseq_analysis!52 · created Jul 10, 2019 by Jeremy Mathews master
updated Jul 11, 2019
fixed style

BICF/Astrocyte/cellranger_mkfastq!39 · created Jul 10, 2019 by Gervaise Henry v1.2.0
documentation
- Merged
updated Jul 10, 2019
fixed style

BICF/Astrocyte/cellranger_count!48 · created Jul 10, 2019 by Gervaise Henry v1.2.0
documentation
updated Jul 10, 2019
Update .gitlab-ci.yml

BICF/Astrocyte/sra_pipeline!28 · created Jul 10, 2019 by Jonathan Gesell
- Merged
updated Jul 10, 2019
Update biohpc.config

BICF/Astrocyte/sra_pipeline!27 · created Jul 10, 2019 by Jonathan Gesell
Bug fixes
updated Jul 10, 2019
Update gitignore with nextflow and update software reference test

BICF/Astrocyte/chipseq_analysis!53 · created Jul 10, 2019 by Jeremy Mathews 1.0.6 master
enhancement
updated Jul 10, 2019
6 docker integration

BICF/Astrocyte/sra_pipeline!26 · created Jul 09, 2019 by Jonathan Gesell
testing
updated Jul 09, 2019
Issues #57 and #59 cause Spencer said today 3 of 3 checklist items completed

BICF/Astrocyte/chipseq_analysis!50 · created Jul 08, 2019 by Jeremy Mathews 1.0.6 master
enhancement
- Merged
- 1
updated Jul 09, 2019
Resolve "Check file inputs"

BICF/Astrocyte/rnaseq!7 · created Jun 27, 2019 by Jeremy Mathews
updated Jul 08, 2019
Create Design file for count with 1 bcl input

BICF/Astrocyte/cellranger_mkfastq!38 · created Jul 08, 2019 by Jeremy Mathews v1.2.0
To Do enhancement
updated Jul 08, 2019
6 docker integration

BICF/Astrocyte/sra_pipeline!25 · created Jul 08, 2019 by Jonathan Gesell
testing
updated Jul 08, 2019
Update main.nf

BICF/Astrocyte/sra_pipeline!24 · created Jul 05, 2019 by Jonathan Gesell
Bug fixes
updated Jul 05, 2019
6 docker integration

BICF/Astrocyte/sra_pipeline!23 · created Jul 05, 2019 by Jonathan Gesell
testing
updated Jul 05, 2019
5 correct config

BICF/Astrocyte/sra_pipeline!20 · created Jul 01, 2019 by Jonathan Gesell
Bug fixes
updated Jul 01, 2019