Merge requests · BICF

Resolve "Containerize"

BICF/Astrocyte/cellranger_count!62 · created Apr 15, 2020 by Gervaise Henry v2.1.1
Doing enhancement
updated Apr 15, 2020
Resolve "Update params to current standards"

BICF/Astrocyte/cellranger_count!61 · created Apr 14, 2020 by Gervaise Henry v2.1.1
Doing enhancement
updated Apr 15, 2020
Add in quiet option.

onboarding!25 · created Apr 14, 2020 by Venkat Malladi
- Merged
updated Apr 14, 2020
Resolve "Add 3':5' param"

BICF/Astrocyte/cellranger_count!60 · created Apr 14, 2020 by Gervaise Henry v2.1.1
Doing critical enhancement
- Merged
updated Apr 14, 2020
Resolve "CI and Nextflow configuration"

onboarding!24 · created Apr 13, 2020 by Venkat Malladi
- Merged
- 6
updated Apr 13, 2020
Add software development.

onboarding!23 · created Apr 08, 2020 by Venkat Malladi
- Merged
updated Apr 08, 2020
Add in authorship for softare.

onboarding!22 · created Apr 02, 2020 by Venkat Malladi
- Merged
updated Apr 02, 2020
Add in Authorship Guidelines

onboarding!21 · created Mar 31, 2020 by Venkat Malladi
- Merged
updated Mar 31, 2020
Resolve "Add percent of reads - mitochondria" 5 of 5 checklist items completed

BICF/Astrocyte/atacseq_analysis!16 · created Mar 24, 2020 by Holly Ruess Version 2.0 master
enhancment
- Merged
- 1
updated Mar 24, 2020
Resolve "Single Rep Pool and Pseudo" 3 of 3 checklist items completed

BICF/Astrocyte/chipseq_analysis!63 · created Feb 12, 2020 by Venkat Malladi 1.1.0 master
bug
- Merged
- 3
updated Mar 24, 2020
Update to test with new astrocyte runner. 0 of 4 checklist items completed

BICF/Astrocyte/chipseq_analysis!66 · created Mar 19, 2020 by Venkat Malladi 1.1.0 master
- Merged
- 1
updated Mar 21, 2020
Resolve "Python Version not in Software Version" 3 of 3 checklist items completed

BICF/Astrocyte/chipseq_analysis!64 · created Feb 12, 2020 by Venkat Malladi 1.1.1 master
bug
updated Mar 02, 2020
Resolve "callPeaksMACS exits when data is bad" 3 of 3 checklist items completed

BICF/Astrocyte/chipseq_analysis!62 · created Feb 12, 2020 by Venkat Malladi 1.1.1 master
bug
updated Feb 29, 2020
Add in tasks.

onboarding!18 · created Jan 24, 2020 by Venkat Malladi
- Merged
updated Feb 26, 2020
Resolve "Generate MultiQC report"

BICF/Astrocyte/atacseq_analysis!15 · created Feb 25, 2020 by Holly Ruess Version 2.0 master
enhancment
updated Feb 25, 2020
Resolve "BUG: thread error on Astrocyte"

BICF/Astrocyte/cellranger_count!59 · created Feb 21, 2020 by Gervaise Henry v2.1.1
Doing bug confirmed critical
updated Feb 21, 2020
Changed singularity container to allow for rendering of references. 3 of 3 checklist items completed

BICF/Astrocyte/chipseq_analysis!65 · created Feb 12, 2020 by Venkat Malladi 1.1.1 master
bug
updated Feb 18, 2020
Update index.md to match ReadMe.md

BICF/Astrocyte/sra_pipeline!53 · created Feb 07, 2020 by Jonathan Gesell
Bug fixes
updated Feb 07, 2020
Update README.md

BICF/Astrocyte/sra_pipeline!52 · created Feb 06, 2020 by Jonathan Gesell
updated Feb 06, 2020
Corrected typos in ReadMe.md

BICF/Astrocyte/sra_pipeline!51 · created Feb 06, 2020 by Jonathan Gesell
Updates error correction
updated Feb 06, 2020