Merge requests · BICF

Resolve "BUG: thread error on Astrocyte"

BICF/Astrocyte/cellranger_count!59 · created Feb 21, 2020 by Gervaise Henry v2.1.1
Doing bug confirmed critical
updated Feb 21, 2020
Changed singularity container to allow for rendering of references. 3 of 3 checklist items completed

BICF/Astrocyte/chipseq_analysis!65 · created Feb 12, 2020 by Venkat Malladi 1.1.1 master
bug
updated Feb 18, 2020
Resolve "Python Version not in Software Version" 3 of 3 checklist items completed

BICF/Astrocyte/chipseq_analysis!64 · created Feb 12, 2020 by Venkat Malladi 1.1.1 master
bug
updated Mar 02, 2020
Resolve "Single Rep Pool and Pseudo" 3 of 3 checklist items completed

BICF/Astrocyte/chipseq_analysis!63 · created Feb 12, 2020 by Venkat Malladi 1.1.0 master
bug
- Merged
- 3
updated Mar 24, 2020
Resolve "callPeaksMACS exits when data is bad" 3 of 3 checklist items completed

BICF/Astrocyte/chipseq_analysis!62 · created Feb 12, 2020 by Venkat Malladi 1.1.1 master
bug
updated Feb 29, 2020
Resolve "Update to Singularity Image 2.0.0 compatability."

BICF/Astrocyte/sra_pipeline!50 · created Feb 06, 2020 by Jonathan Gesell Singularity 2.0.0 Compatability
Updates
updated Feb 06, 2020
Resolve "Update to Singularity Image 2.0.0 compatability."

BICF/Astrocyte/sra_pipeline!48 · created Feb 05, 2020 by Jonathan Gesell Singularity 2.0.0 Compatability
Updates
updated Feb 05, 2020
Remove artifacts.

BICF/Astrocyte/chipseq_analysis!61 · created Jan 28, 2020 by Venkat Malladi 1.1.1 master
bug
- Merged
updated Jan 28, 2020
Update to 2.0.0 compliance, and updated config file to be more universal.

BICF/Astrocyte/sra_pipeline!47 · created Jan 16, 2020 by Jonathan Gesell Singularity 2.0.0 Compatability
Updates
- Merged
updated Jan 16, 2020
Resolve "Fix BioHPC config"

BICF/Astrocyte/atacseq_analysis!14 · created Jan 07, 2020 by Holly Ruess Version 2.0 master
enhancment
updated Jan 07, 2020
Resolve "fix consensus peaks"

BICF/Astrocyte/atacseq_analysis!13 · created Jan 06, 2020 by Holly Ruess Version 2.0 master
enhancment
updated Jan 07, 2020
Develop

BICF/Astrocyte/cellranger_mkfastq!59 · created Jan 06, 2020 by Gervaise Henry v2.1.5 master
updated Jan 06, 2020
Resolve "Fix Pool and Pseudoreps"

BICF/Astrocyte/atacseq_analysis!12 · created Jan 02, 2020 by Holly Ruess Version 2.0 master
enhancment
updated Jan 03, 2020
39 aws

BICF/Astrocyte/cellranger_mkfastq!57 · created Dec 31, 2019 by Gervaise Henry v2.1.5
updated Dec 31, 2019
Resolve "Fix Convert Reads"

BICF/Astrocyte/atacseq_analysis!11 · created Dec 20, 2019 by Holly Ruess Version 2.0 master
enhancment
updated Dec 27, 2019
Resolve "Fix Experiment QC"

BICF/Astrocyte/atacseq_analysis!10 · created Dec 19, 2019 by Holly Ruess Version 2.0 master
enhancment
updated Dec 20, 2019
fix filter reads

BICF/Astrocyte/atacseq_analysis!9 · created Dec 18, 2019 by Holly Ruess Version 2.0 master
enhancment
updated Dec 18, 2019
Resolve "Fix Align Reads"

BICF/Astrocyte/atacseq_analysis!8 · created Dec 16, 2019 by Holly Ruess Version 2.0 master
enhancment
updated Dec 16, 2019
Resolve "Fix Trim Reads"

BICF/Astrocyte/atacseq_analysis!7 · created Dec 11, 2019 by Venkat Malladi Version 2.0 master
enhancment
updated Dec 11, 2019
Resolve "update check design file"

BICF/Astrocyte/atacseq_analysis!3 · created Dec 09, 2019 by Holly Ruess Version 2.0 master
enhancment
- Merged
- 2
updated Dec 09, 2019