Merge requests · BICF

Resolve "Blacklist of regions" 5 of 5 checklist items completed

BICF/Astrocyte/atacseq_analysis!25 · created Jun 09, 2020 by Holly Ruess Version 2.0 master
enhancment
updated Jun 09, 2020
Resolve "blank page on survival plot download"

BICF/Astrocyte/tcga_shiny!14 · created May 22, 2019 by Jeremy Mathews 1.0.1
bug
updated May 22, 2019
Resolve "BUG: thread error on Astrocyte"

BICF/Astrocyte/cellranger_count!59 · created Feb 21, 2020 by Gervaise Henry v2.1.1
Doing bug confirmed critical
updated Feb 21, 2020
Resolve "callPeaksMACS exits when data is bad" 3 of 3 checklist items completed

BICF/Astrocyte/chipseq_analysis!62 · created Feb 12, 2020 by Venkat Malladi 1.1.1 master
bug
updated Feb 29, 2020
Resolve "Cancer Drug Table"

BICF/KCE/kce_etl!10 · created Dec 12, 2019 by Venkat Malladi
- Merged
updated Dec 12, 2019
Resolve "Change location of multiqc config and name"

BICF/Astrocyte/cellranger_mkfastq!15 · created Apr 22, 2019 by Gervaise Henry
To Do
updated Apr 22, 2019
Resolve "Change nextflow fastq rename to iterate sample not lane"

BICF/Astrocyte/cellranger_count!33 · created Mar 27, 2019 by Gervaise Henry
updated Apr 26, 2019
Resolve "Change process selector"

BICF/Astrocyte/cellranger_count!34 · created Mar 27, 2019 by Gervaise Henry
updated Apr 26, 2019
Resolve "Change Tests for Peak comparison to be greater than or equal to"

BICF/Astrocyte/chipseq_analysis!44 · created May 15, 2019 by Venkat Malladi 1.0.4 master
enhancement
updated May 15, 2019
Resolve "Change to cellranger v 3.1.0"

BICF/Astrocyte/cellranger_mkfastq!42 · created Jul 31, 2019 by Jeremy Mathews v1.3.0
enhancement
updated Jul 31, 2019
Resolve "Check file inputs"

BICF/Astrocyte/rnaseq!7 · created Jun 27, 2019 by Jeremy Mathews
updated Jul 08, 2019
Resolve "CI and Nextflow configuration"

onboarding!24 · created Apr 13, 2020 by Venkat Malladi
- Merged
- 6
updated Apr 13, 2020
Resolve "Cleanup process outputs"

BICF/Astrocyte/cellranger_mkfastq!56 · created Nov 07, 2019 by Gervaise Henry v2.1.5
enhancement
updated Nov 07, 2019
Resolve "Containerize"

BICF/Astrocyte/cellranger_count!62 · created Apr 15, 2020 by Gervaise Henry v2.1.1
Doing enhancement
updated Apr 15, 2020
Resolve "Create output directory option"

BICF/Astrocyte/cellranger_count!11 · created Mar 05, 2019 by Gervaise Henry Put on Astrocyte Production (1.0.0)
updated Mar 05, 2019
Resolve "Design file - filename with spaces error"

BICF/Astrocyte/cellranger_mkfastq!53 · created Aug 29, 2019 by Jeremy Mathews v2.1.5
bug confirmed
updated Sep 03, 2019
Resolve "DesignFile path not followed"

BICF/Astrocyte/chipseq_analysis!38 · created May 06, 2019 by Venkat Malladi master
bug
updated May 06, 2019
Resolve "Develop CI"

BICF/Astrocyte/cellranger_count!27 · created Mar 22, 2019 by Gervaise Henry
updated Mar 22, 2019
Resolve "Develop CI"

BICF/Astrocyte/cellranger_count!21 · created Mar 12, 2019 by Gervaise Henry
updated Mar 12, 2019
Resolve "Exclude changes in *.md for CI"

BICF/Astrocyte/cellranger_mkfastq!43 · created Jul 31, 2019 by Jeremy Mathews
enhancement
- Merged
updated Jul 31, 2019