Merge requests · BICF / Astrocyte / chipseq_analysis

Merge trains

Update references.md

!52 · created Jul 10, 2019 by Jeremy Mathews master
updated Jul 11, 2019
Fix spacing.

!48 · created May 17, 2019 by Venkat Malladi master
documentation
- Merged
updated May 17, 2019
Resolve "Add license" 2 of 2 checklist items completed

!47 · created May 17, 2019 by Venkat Malladi master
documentation enhancement
updated May 17, 2019
Add in initial template.

!45 · created May 15, 2019 by Venkat Malladi master
enhancement
updated May 15, 2019
Resolve "DesignFile path not followed"

!38 · created May 06, 2019 by Venkat Malladi master
bug
updated May 06, 2019
Fix astrocyte yml name fix.

!37 · created May 06, 2019 by Venkat Malladi master
bug
- Merged
updated May 06, 2019
Resolve "New folders for all steps"

!22 · created Mar 16, 2019 by Venkat Malladi master
updated Mar 16, 2019
Resolve "skip motif search and diff bind"

!21 · created Mar 09, 2019 by Venkat Malladi master
- Merged
updated Mar 12, 2019
Resolve "Use SampleIds/ Experiment Id as file names throughtout pipeline"

!20 · created Mar 09, 2019 by Venkat Malladi master
- Merged
updated Mar 10, 2019
27 pdfs plots

!19 · created Jan 31, 2019 by Venkat Malladi master
updated Jan 31, 2019
Add option for outdir.

!16 · created Jan 06, 2019 by Venkat Malladi master
- Merged
- 1
updated Jan 06, 2019
25 pairedend qc

!15 · created Jan 05, 2019 by Venkat Malladi master
- Merged
- 1
updated Jan 06, 2019
updated all processes to use samtools/1.6

!14 · created Aug 02, 2018 by Jonathan Gesell master
- Merged
updated Aug 02, 2018
Resolve "Add in Macs2 support"

!13 · created Nov 20, 2017 by Venkat Malladi master
updated Nov 20, 2017
Resolve "Pool and Pseudoreplication"

!12 · created Oct 30, 2017 by Venkat Malladi master
updated Oct 30, 2017
Resolve "Include Phantompeakqualtools step"

!11 · created Oct 24, 2017 by Venkat Malladi master
updated Oct 24, 2017
Resolve "Make tagAlign files"

!10 · created Oct 23, 2017 by Venkat Malladi master
updated Oct 23, 2017
Remove fastqc step.

!9 · created Oct 18, 2017 by Venkat Malladi master
updated Oct 18, 2017
Add in experiment_id and check to see if unique replicate ids are given.

!7 · created Oct 11, 2017 by Venkat Malladi master
updated Oct 11, 2017
Resolve "Bam Stats and Filter"

!6 · created Oct 11, 2017 by Venkat Malladi master
updated Oct 11, 2017