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- workflow/nextflow.config 18 additions, 1 deletionworkflow/nextflow.config
- workflow/scripts/annotate_peaks.R 16 additions, 28 deletionsworkflow/scripts/annotate_peaks.R
- workflow/scripts/call_peaks_macs.py 14 additions, 2 deletionsworkflow/scripts/call_peaks_macs.py
- workflow/scripts/generate_versions.py 1 addition, 1 deletionworkflow/scripts/generate_versions.py
- workflow/scripts/plotProfile.sh 0 additions, 15 deletionsworkflow/scripts/plotProfile.sh
- workflow/scripts/plot_profile.sh 105 additions, 0 deletionsworkflow/scripts/plot_profile.sh
- workflow/scripts/pool_and_psuedoreplicate.py 39 additions, 75 deletionsworkflow/scripts/pool_and_psuedoreplicate.py
- workflow/scripts/xcor.py 8 additions, 2 deletionsworkflow/scripts/xcor.py
- workflow/tests/plot_profile.bats 26 additions, 0 deletionsworkflow/tests/plot_profile.bats
- workflow/tests/test_annotate_peaks.py 9 additions, 1 deletionworkflow/tests/test_annotate_peaks.py
- workflow/tests/test_call_peaks_macs.py 21 additions, 2 deletionsworkflow/tests/test_call_peaks_macs.py
- workflow/tests/test_diff_peaks.py 2 additions, 2 deletionsworkflow/tests/test_diff_peaks.py
- workflow/tests/test_generate_software_references.py 12 additions, 0 deletionsworkflow/tests/test_generate_software_references.py
- workflow/tests/test_generate_software_versions.py 2 additions, 1 deletionworkflow/tests/test_generate_software_versions.py
- workflow/tests/test_overlap_peaks.py 7 additions, 1 deletionworkflow/tests/test_overlap_peaks.py
- workflow/tests/test_plot_profile.py 19 additions, 0 deletionsworkflow/tests/test_plot_profile.py
- workflow/tests/test_pool_and_psuedoreplicate.py 29 additions, 9 deletionsworkflow/tests/test_pool_and_psuedoreplicate.py
- workflow/tests/test_xcor.py 6 additions, 6 deletionsworkflow/tests/test_xcor.py
workflow/scripts/plotProfile.sh
deleted
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workflow/scripts/plot_profile.sh
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workflow/tests/plot_profile.bats
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workflow/tests/test_plot_profile.py
0 → 100644