Commit daef5d27 authored by zhanxw's avatar zhanxw

add zstd sqlite

parent f01a6cf9
......@@ -33,7 +33,13 @@ BZIP2_INC = ../third/bzip2
$(BZIP2_INC):
(cd ../third; $(MAKE) bzip2)
THIRD_INC = $(BCF_INC) $(TABIX_INC) $(PCRE_INC) $(BZIP2_INC) $(ZLIB_INC) $(GSL_INC)
SQLITE_INC = ../third/sqlite/include
SQLITE_LIB = ../third/sqlite/lib/libsqlite3.a
ZSTD_INC = ../third/zstd/lib
ZSTD_LIB = ../thid/zstd/lib/libzstd.a
THIRD_INC = $(BCF_INC) $(TABIX_INC) $(PCRE_INC) $(BZIP2_INC) $(ZLIB_INC) $(GSL_INC) $(ZSTD_INC)
THIRD_INC_FLAGS = $(addprefix -I,$(THIRD_INC))
### put BCF_INC ahead of TABIX, so correct kseq.h can be included
......
# download all third party library and compile them
LIB = tabix pcre eigen gsl bzip2 samtools zlib rapidjson
LIB = tabix pcre eigen gsl bzip2 samtools zlib rapidjson sqlite zstd
all: $(LIB)
tabix: tabix-0.2.6.tar.bz2
......
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