Commit 12adaf01 authored by Venkat Malladi's avatar Venkat Malladi

Update font size.

parent a32bbea9
......@@ -225,11 +225,14 @@ p <- ggplot(df_et_tcag_gtex_cn_type_summary, aes(x = as.factor(Type), fill= Type
middle = PARP1,
ymin = PARP1 - 2*se,
ymax = PARP1 + 2*se),
stat = "identity",lwd=1.5) + geom_hline(yintercept = mean(df_et_tcag_gtex_cn$PARP1), linetype = 2) + labs(y="RPKM",x="Type") + theme_bw() + theme(panel.grid.major = element_blank(),panel.grid.minor = element_blank(),axis.ticks=element_line(size=1))
stat = "identity",lwd=1.5) + labs(y="log2(RPKM)",x="Type") + theme_bw() + theme(panel.grid.major = element_blank(),panel.grid.minor = element_blank(),axis.ticks=element_line(size=1), axis.text=element_text(size=10), axis.title=element_text(size=12) ) + scale_y_continuous(limits=c(3,5.5))
jpeg('figures/PARP1_breast_correlation_TYPE_boxplot.jpg')
p
dev.off()
wilcox.test(PARP1~Type, data=df_et_tcag_gtex_cn, paired=F)
parp1_type.aov = aov(PARP1 ~ Type ,data=df_et_tcag_gtex_cn_type_summary)
summary(parp1_type.aov)
......@@ -242,11 +245,13 @@ p <- ggplot(df_et_tcag_gtex_cn_type_summary, aes(x = as.factor(Type), fill= Type
middle = DDX21,
ymin = DDX21 - 2*se,
ymax = DDX21 + 2*se),
stat = "identity",lwd=1.5) + geom_hline(yintercept = mean(df_et_tcag_gtex_cn$DDX21), linetype = 2) + labs(y="RPKM",x="Type") + theme_bw() + theme(panel.grid.major = element_blank(),panel.grid.minor = element_blank(),axis.ticks=element_line(size=1))
stat = "identity",lwd=1.5) + labs(y="log2(RPKM)",x="Type") + theme_bw() + theme(panel.grid.major = element_blank(),panel.grid.minor = element_blank(),axis.ticks=element_line(size=1), axis.text=element_text(size=10), axis.title=element_text(size=12)) + scale_y_continuous(limits=c(3.75,4.75))
jpeg('figures/DDX21_breast_correlation_TYPE_boxplot.jpg')
p
dev.off()
wilcox.test(DDX21~Type, data=df_et_tcag_gtex_cn, paired=F)
ddx21_type.aov = aov(DDX21 ~ Type ,data=df_et_tcag_gtex_cn_type_summary)
summary(ddx21_type.aov)
......
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