Commit 031bc50d authored by David Trudgian's avatar David Trudgian

Add additional genome options.

parent 82caaca4
......@@ -90,8 +90,11 @@ workflow_parameters:
- id: index
type: select
choices:
- [ '/project/apps_database/iGenomes/Homo_sapiens/UCSC/hg38/Sequence/BWAIndex/genome.fa', 'UCSC hg38']
- [ '/project/apps_database/iGenomes/Homo_sapiens/UCSC/hg19/Sequence/BWAIndex/genome.fa', 'UCSC hg19']
- [ '/project/apps_database/iGenomes/Homo_sapiens/UCSC/hg18/Sequence/BWAIndex/genome.fa', 'UCSC hg18']
- [ '/project/apps_database/iGenomes/Mus_musculus/UCSC/mm10/Sequence/BWAIndex/genome.fa', 'UCSC mm10']
- [ '/project/apps_database/iGenomes/Mus_musculus/UCSC/mm9/Sequence/BWAIndex/genome.fa', 'UCSC mm9']
required: true
description: |
Reference genome for BWA alignment
......@@ -115,4 +118,4 @@ vizapp_cran_packages:
# # List of any Bioconductor packages, not provided by the modules, that must be made
# available to the vizapp
vizapp_bioc_packages:
- chipseq
- chipseq
\ No newline at end of file
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