Containerized the workflow and vizapp

Fully containerize the workflow and vizapp

Containerize Vizapp by putting R Shiny and libs inside a docker container on BioHPC GitLab

Work with Astrocyte 2.0.1 and newer. Updated Vizapp to use BioHPC R container

Work with Astrocyte 2.0.0 and newer. Updated Vizapp

Fix typos in vizapp

Fixed the vizapp error in test_0.0.1

Test for the newly implemented Vizapp

Basic CI, R to 3.4.1

Fix Picard TMP_DIR issue