Commit f2fe1f9d authored by David Trudgian's avatar David Trudgian
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# BioHPC param_runner
STATUS - Development (not yet functional)
The BioHPC `param_runner` is a command line tool to run a command multiple times, exploring a defined parameter space, summarizing results.
This tool uses a simple YAML configuration file to define a parameter space to exhaustively search, and runs tasks in parallel by distributing them over a set of allocated nodes on the BioHPC Nucleus cluster. Supported parameter spaces are:
* Arithmetic progressions of integers or real numbers.
* Geometric progressions of integers or real numbers.
* Defined lists of strings or other values.
The output of a command run with a certain parameter combination can be captured for summary in tabular format by defining regular expressions matching output.
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