Commits · d34a319da82c0f95734a0ab96c848e076a384d5e · Holly Ruess / celseq2

26 Mar, 2018 3 commits
- 🍺 release 0.4.8 · d34a319d
  yy1533 authored Mar 26, 2018
  
  d34a319d
- Merge branch 'master' of github.com:yanailab/celseq2 · 0be691b9
  yy1533 authored Mar 26, 2018
  
  0be691b9
- 🇨🇳 0.4.8 stable design of workflow; compatible to indrop pipeline · 44114efa
  yy1533 authored Mar 26, 2018
  
  44114efa
23 Mar, 2018 6 commits
- 💪 use genometools to select gene names based on gene_biotype · dde40ffa
  yy1533 authored Mar 23, 2018
  
  dde40ffa
- Merge pull request #15 from Puriney/master · ec5d06b2
  Yun YAN authored Mar 23, 2018
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Release 0.4.7
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  ec5d06b2
- Merge branch 'master' of github.com:yanailab/celseq2 · 243e6b68
  yy1533 authored Mar 23, 2018
  
  243e6b68
- 🇨🇳 release 0.4.7 · 1d19ff98
  yy1533 authored Mar 23, 2018
  
  1d19ff98
- 🐾 0.4.7 : remove unnecessary sort · 0f74ed84
  yy1533 authored Mar 23, 2018
  
  0f74ed84
- 🐾 on 0.4.7 : dummy species contains biotype of gene · 70f61aa5
  yy1533 authored Mar 23, 2018
  
  70f61aa5
22 Mar, 2018 2 commits
- Merge pull request #14 from Puriney/master · 42966726
  Yun YAN authored Mar 22, 2018
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💪 robust design of workflow
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  42966726
- 💪 robust design of workflow · 348a3d94
  yy1533 authored Mar 22, 2018
  
  348a3d94
20 Mar, 2018 5 commits
- Merge pull request #13 from Puriney/master · cb5900ed
  Yun YAN authored Mar 20, 2018
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celseq2-to-st understands CSV
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  cb5900ed
- Merge branch 'master' of github.com:yanailab/celseq2 · cdbc14c5
  yy1533 authored Mar 20, 2018
  
  cdbc14c5
- 💪 celseq2-to-st supports the csv result of celseq2 · 14393b9f
  yy1533 authored Mar 20, 2018
  
  14393b9f
- Merge pull request #12 from Puriney/master · b62cd1d2
  Yun YAN authored Mar 20, 2018
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🇨🇳 Upgrade to 0.4.6
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  b62cd1d2
- 🐾 report star alignment log. Related to #3 · 66194ddc
  yy1533 authored Mar 20, 2018
  
  66194ddc
19 Mar, 2018 4 commits
- Merge branch 'master' of github.com:yanailab/celseq2 · ac16e685
  yy1533 authored Mar 19, 2018
  
  ac16e685
- 🍺 close #3. CSV report on alignment, e.g. report/item-xxx/alignment_bowtie2.csv · 1a186834
  yy1533 authored Mar 19, 2018
  
  1a186834
- 💪 · 99f47ba8
  yy1533 authored Mar 19, 2018
  
  99f47ba8
- 🍺 function to parse Bowtie2 log · f7227fe8
  yy1533 authored Mar 19, 2018
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🍺 function to parse Bowtie2 log

💪
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  f7227fe8
16 Mar, 2018 2 commits
- 🍺 function to parse STAR log · 2fdbdbb3
  yy1533 authored Mar 16, 2018
  
  2fdbdbb3
- 💪 intermediate miscs files generated by STAR are cleaned 🐾 working on 0.4.5 · cb1168e3
  yy1533 authored Mar 16, 2018
  
  cb1168e3
13 Mar, 2018 2 commits
- Merge pull request #11 from Puriney/master · 6545a9a4
  Yun YAN authored Mar 13, 2018
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🐾 improve celseq2-to-st
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  6545a9a4
- 🐾 improve celseq2-to-st by a) fill spaces of gene names b) support choice... · f43268f9
  yy1533 authored Mar 13, 2018
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🐾 improve celseq2-to-st by a) fill spaces of gene names b) support choice to exclude empty splot and nondetected genes
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  f43268f9
13 Feb, 2018 7 commits
- Merge pull request #9 from Puriney/master · 8031a2bc
  Yun YAN authored Feb 13, 2018
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🐶 📖 fix broken links on README
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  8031a2bc
- 📖 fix broken link. Close #6 · 933ebcae
  yy1533 authored Feb 13, 2018
  
  933ebcae
- 🐾 · 55f1e0ba
  yy1533 authored Feb 13, 2018
  
  55f1e0ba
- Merge pull request #8 from Puriney/master · 040d2014
  Yun YAN authored Feb 13, 2018
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🇨🇳 v0.4.3 improve pipeline design to avoid STAR memory over usage
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  040d2014
- 🇨🇳 v0.4.3 improve pipeline design to avoid STAR memory overusage · 756fd948
  yy1533 authored Feb 13, 2018
  
  756fd948
- Merge pull request #7 from Puriney/master · 74b01927
  Yun YAN authored Feb 13, 2018
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🇨🇳 v0.4.2 improve pipeline design to avoid silent pre-inhibition
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  74b01927
- 🇨🇳 v0.4.2 improve pipeline design to avoid silent pre-inhibition · 40c4d0ff
  yy1533 authored Feb 13, 2018
  
  40c4d0ff
20 Dec, 2017 3 commits
- 🇨🇳 0.4.1 · b442cef5
  Puriney authored Dec 20, 2017
  
  b442cef5
- 🍺 STAR is supported. Its default behavior is used · 5ac122c3
  Puriney authored Dec 20, 2017
  
  5ac122c3
- 🐾 support STAR · ec984be2
  Puriney authored Dec 20, 2017
  
  ec984be2
08 Nov, 2017 1 commit
- 🐾 update version of dependencies · 9fa18f39
  yy1533 authored Nov 08, 2017
  
  9fa18f39
02 Nov, 2017 2 commits
- fix license · 7316eb82
  Florian Wagner authored Nov 02, 2017
  
  7316eb82
- fix license · a9f09dc7
  Florian Wagner authored Nov 02, 2017
  
  a9f09dc7
15 Oct, 2017 1 commit
- Update LICENSE · 516f62b5
  Yun YAN authored Oct 15, 2017
  
  516f62b5
11 Oct, 2017 2 commits
- 💊 typo · 70b5a6e6
  yy1533 authored Oct 11, 2017
  
  70b5a6e6
- 📖 · 2a99bebe
  yy1533 authored Oct 11, 2017
  
  2a99bebe