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Holly Ruess
celseq2
Commits
0493caa7
Commit
0493caa7
authored
May 09, 2018
by
yy1533
Browse files
💊
forgot to claim the value is median
parent
f7f3388f
Changes
2
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Inline
Side-by-side
celseq2/qc.py
View file @
0493caa7
...
...
@@ -218,7 +218,8 @@ def plotly_qc_st(fpath, saveto, sep='\t', name=''):
mask_by
=
ST_qc
.
total_num_UMIs
,
hover_text
=
ST_qc
.
total_num_UMIs
.
astype
(
'str'
),
colorscale
=
'Viridis'
,
mask_title
=
'#Total UMIs {})'
.
format
(
ST_qc
.
total_num_UMIs
.
median
()))
mask_title
=
(
'#Total UMIs '
'(median={})'
).
format
(
ST_qc
.
total_num_UMIs
.
median
()))
# 3/3
plotly_ST_mt
=
plotly_scatter
(
x
=
ST_qc
.
Row
,
y
=
ST_qc
.
Col
,
...
...
@@ -239,6 +240,7 @@ def plotly_qc_st(fpath, saveto, sep='\t', name=''):
fig
[
'layout'
].
update
(
height
=
600
,
width
=
1900
,
title
=
name
)
fig
.
layout
.
showlegend
=
False
# Manually change the locations of other two color bars to proper places
fig
.
data
[
0
].
marker
.
colorbar
.
x
=
0.28
fig
.
data
[
1
].
marker
.
colorbar
.
x
=
0.64
...
...
celseq2/version.py
View file @
0493caa7
__version__
=
'0.5.
2
'
__version__
=
'0.5.
3
'
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