From 5a098a61e601e39498be272fe6fcb399de690c13 Mon Sep 17 00:00:00 2001
From: Brandi Cantarel <brandi.cantarel@utsouthwestern.edu>
Date: Mon, 12 Mar 2018 09:18:49 -0500
Subject: [PATCH] add updates dnaseq

---
 alignment/dnaseqalign.sh | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/alignment/dnaseqalign.sh b/alignment/dnaseqalign.sh
index 219f7f8..ffa99c4 100644
--- a/alignment/dnaseqalign.sh
+++ b/alignment/dnaseqalign.sh
@@ -12,7 +12,7 @@ usage() {
   exit 1
 }
 OPTIND=1 # Reset OPTIND
-while getopts :r:x:y:p:uh opt
+while getopts :r:x:y:p:u:h opt
 do
     case $opt in
         r) index_path=$OPTARG;;
-- 
GitLab