Generalize renameGenes
Summary
Column headers in conversion files differ and cause an error
Steps to reproduce
Use params.convert "GRCh36p12"
Observed bug behavior
Error in fix.by(by.y, y) : 'by' must specify a uniquely valid column
Calls: merge -> merge.data.frame -> fix.by
Execution halted
Expected behavior
Relevant logs and/or screenshots
Potential fixes
Use column indices instad of names