From e1e536a593fcafa8c232a45bf2f223cf9b39bedc Mon Sep 17 00:00:00 2001
From: "Gervaise H. Henry" <gervaise.henry@utsouthwestern.edu>
Date: Mon, 25 Nov 2019 10:54:04 -0600
Subject: [PATCH] Add back matrix outputting
---
workflow/scrna-seq_imgen.nf | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/workflow/scrna-seq_imgen.nf b/workflow/scrna-seq_imgen.nf
index 54a11a2..1ac0840 100644
--- a/workflow/scrna-seq_imgen.nf
+++ b/workflow/scrna-seq_imgen.nf
@@ -105,7 +105,7 @@ id.into {
*/
process renameGenes {
tag "NCBI"
- //publishDir "${outDir}/matrix", mode: 'copy', overwrite: false
+ publishDir "${outDir}/matrix", mode: 'copy', overwrite: false
input:
file matrixRaw
@@ -224,4 +224,4 @@ process plotViolinBox {
done < groups.txt
wait
"""
-}
\ No newline at end of file
+}
--
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