GUDMAP/RBK RNA-Seq Pipeline
Introduction
To Run:
- Available parameters:
- FULL EXAMPLE:
nextflow run workflow/rna-seq.nf - Design example:
Credits
This worklow is was developed by Bioinformatic Core Facility (BICF), Department of Bioinformatics
PI
Venkat S. Malladi
Faculty Associate & Director
Bioinformatics Core Facility
UT Southwestern Medical Center
orcid.org/0000-0002-0144-0564
venkat.malladi@utsouthwestern.edu
Developers
Gervaise H. Henry
Computational Biologist
Department of Urology
UT Southwestern Medical Center
orcid.org/0000-0001-7772-9578
gervaise.henry@utsouthwestern.edu
Jonathan Gesell
Computational Biologist
Bioinformatics Core Facility
UT Southwestern Medical Center
orcid.org/0000-0001-5902-3299
johnathan.gesell@utsouthwestern.edu
Jeremy A. Mathews
Computational Intern
Bioinformatics Core Facility
UT Southwestern Medical Center
orcid.org/0000-0002-2931-1430
jeremy.mathews@utsouthwestern.edu
Please cite in publications: Pipeline was developed by BICF from funding provided by Cancer Prevention and Research Institute of Texas (RP150596).