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  • GUDMAP_RBK
  • RNA-seqRNA-seq
  • Issues

  • Open 12
  • Closed 123
  • All 135
New issue
  • Priority Created date Updated date Milestone due date Due date Popularity Label priority Manual Title Weight Blocking
  • Fix endness force
    #135 · created Jul 30, 2021 by Gervaise Henry   v2.0.1   Doing bug critical pipeline
    • CLOSED
    • 2
    • 0
    updated Jul 31, 2021
  • Add override (force) for seq-type
    #131 · created Jul 07, 2021 by Gervaise Henry   v2.0.1   7   Doing confirmed critical enhancement pipeline
    • CLOSED
    • 1
    • 0
    updated Jul 26, 2021
  • Move seqwho reference
    #127 · created May 07, 2021 by Gervaise Henry   v2.0.1   5   Doing critical pipeline
    • CLOSED
    • 1
    • 1
    updated Jul 26, 2021
  • Change the CI unit test RIDs
    #133 · created Jul 19, 2021 by Gervaise Henry   v2.0.1   CI/CD bug
    • CLOSED
    • 1
    • 1
    updated Jul 25, 2021
  • samtools sort: couldn't allocate memory for bam_mem
    #108 · created Jan 18, 2021 by Gervaise Henry   v2.0.0   bug critical
    • CLOSED
    • 1
    • 1
    updated Jul 25, 2021
  • Inferred spelt wrong
    #125 · created Apr 20, 2021 by Gervaise Henry   v2.0.1   1   bug pipeline
    • CLOSED
    • 1
    • 0
    updated Jul 25, 2021
  • Fix datahub fetch of references
    #122 · created Feb 10, 2021 by Gervaise Henry   v2.0.0   bug
    • CLOSED
    • 1
    • 0
    updated Jul 25, 2021
  • Legacy Human Experiment to be run   1 of 2 tasks completed
    #120 · created Feb 03, 2021 by Venkat Malladi   analysis
    • CLOSED
    • 0
    updated Jul 25, 2021
  • Legeacy Mouse ID's to be be run   0 of 19 tasks completed
    #121 · created Feb 03, 2021 by Venkat Malladi   analysis
    • CLOSED
    • 0
    updated Jul 25, 2021
  • bdbag cookie link missing
    #132 · created Jul 10, 2021 by Gervaise Henry   v2.0.1   10   bug critical pipeline
    • CLOSED
    • 1
    • 0
    updated Jul 25, 2021
  • bam file in fastq file
    #107 · created Jan 15, 2021 by Venkat Malladi   v2.0.0   bug
    • CLOSED
    • 1
    • 1
    updated Jul 25, 2021
  • fastqc task error check
    #129 · created Jul 05, 2021 by Gervaise Henry   v2.0.1   10   bug pipeline
    • CLOSED
    • 1
    • 0
    updated Jul 25, 2021
  • Files not matching current fastq naming convention
    #109 · created Jan 19, 2021 by Gervaise Henry   v2.0.0   bug
    • CLOSED
    • 1
    • 0
    updated Jul 25, 2021
  • Add forward/reverse as expected vals for stranded
    #113 · created Jan 25, 2021 by Gervaise Henry   v2.0.0   confirmed critical data-hub pipeline
    • CLOSED
    • 1
    updated Jul 25, 2021
  • Ambiguous species & fastq structure submits blank status detail
    #118 · created Feb 02, 2021 by Gervaise Henry   v2.0.0   bug confirmed data-hub pipeline
    • CLOSED
    • 1
    • 0
    updated Jul 25, 2021
  • Server changing... need to change .insert calls
    #134 · created Jul 20, 2021 by Gervaise Henry   v2.0.1   confirmed critical data-hub pipeline
    • CLOSED
    • 1
    • 0
    updated Jul 25, 2021
  • Detect truncation errors of fastq's
    #98 · created Jan 12, 2021 by Gervaise Henry   v2.0.0   To Do pipeline
    • CLOSED
    • 0
    updated Apr 20, 2021
  • RIDs that failed
    #99 · created Jan 12, 2021 by Venkat Malladi   Doing analysis
    • CLOSED
    • 0
    updated Apr 16, 2021
  • Node Failures
    #116 · created Jan 27, 2021 by Gervaise Henry
    • CLOSED
    • 0
    updated Apr 16, 2021
  • Mouse Experiment ID's to be run   5 of 5 tasks completed
    #83 · created Nov 10, 2020 by Venkat Malladi   Doing analysis
    • CLOSED
    • 0
    updated Apr 16, 2021
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