Issues · GUDMAP_RBK / RNA-seq · GitLab

Fix endness force

#135 · created Jul 30, 2021 by Gervaise Henry v2.0.1 Doing bug critical pipeline
- CLOSED
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updated Jul 31, 2021
Server changing... need to change .insert calls

#134 · created Jul 20, 2021 by Gervaise Henry v2.0.1 confirmed critical data-hub pipeline
- CLOSED
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updated Jul 25, 2021
Change the CI unit test RIDs

#133 · created Jul 19, 2021 by Gervaise Henry v2.0.1 CI/CD bug
- CLOSED
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- 1
updated Jul 25, 2021
bdbag cookie link missing

#132 · created Jul 10, 2021 by Gervaise Henry v2.0.1 10 bug critical pipeline
- CLOSED
- 1
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updated Jul 25, 2021
Add override (force) for seq-type

#131 · created Jul 07, 2021 by Gervaise Henry v2.0.1 7 Doing confirmed critical enhancement pipeline
- CLOSED
- 1
- 0
updated Jul 26, 2021
Remove hacky TIN report in MultiQC

#130 · created Jul 05, 2021 by Gervaise Henry v2.x.x To Do enhancement pipeline
- 0
updated Jul 05, 2021
fastqc task error check

#129 · created Jul 05, 2021 by Gervaise Henry v2.0.1 10 bug pipeline
- CLOSED
- 1
- 0
updated Jul 25, 2021
Check if alignData to depend on checkMetadata errors == false

#128 · created Jul 04, 2021 by Gervaise Henry v2.x.x To Do documentation pipeline
- 0
updated Jul 15, 2021
Move seqwho reference

#127 · created May 07, 2021 by Gervaise Henry v2.0.1 5 Doing critical pipeline
- CLOSED
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- 1
updated Jul 26, 2021
Move uploadInputBag to occur right before uploadExecutionRun

#126 · created Apr 22, 2021 by Gervaise Henry v2.x.x To Do pipeline suggestion
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updated Jul 15, 2021
Inferred spelt wrong

#125 · created Apr 20, 2021 by Gervaise Henry v2.0.1 1 bug pipeline
- CLOSED
- 1
- 0
updated Jul 25, 2021
Some seqwho seq-type inferences have commas which mess up error descriptions

#124 · created Apr 20, 2021 by Gervaise Henry v2.x.x To Do bug pipeline
- 0
updated Jul 15, 2021
Handle image caching in CI better

#123 · created Mar 05, 2021 by Gervaise Henry FUTURE Version CI/CD To Do
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updated Mar 05, 2021
Fix datahub fetch of references

#122 · created Feb 10, 2021 by Gervaise Henry v2.0.0 bug
- CLOSED
- 1
- 0
updated Jul 25, 2021
Legeacy Mouse ID's to be be run 0 of 19 tasks completed

#121 · created Feb 03, 2021 by Venkat Malladi analysis
- CLOSED
- 0
updated Jul 25, 2021
Legacy Human Experiment to be run 1 of 2 tasks completed

#120 · created Feb 03, 2021 by Venkat Malladi analysis
- CLOSED
- 0
updated Jul 25, 2021
Fastq files don't match expected pattern

#119 · created Feb 03, 2021 by Venkat Malladi v2.0.0 Rejected
- CLOSED
- 1
updated Feb 03, 2021
Ambiguous species & fastq structure submits blank status detail

#118 · created Feb 02, 2021 by Gervaise Henry v2.0.0 bug confirmed data-hub pipeline
- CLOSED
- 1
- 0
updated Jul 25, 2021
Update $31 snippet to use bash opt-args

#117 · created Jan 30, 2021 by Gervaise Henry FUTURE Version To Do
- 0
updated Mar 19, 2021
Node Failures

#116 · created Jan 27, 2021 by Gervaise Henry
- CLOSED
- 0
updated Apr 16, 2021

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