diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml index 24cd799b2a30541cefd9de3f494f5eb644872148..4d7f37b00efa2a89272e1eb69d5fea366c2aac3d 100644 --- a/.gitlab-ci.yml +++ b/.gitlab-ci.yml @@ -26,7 +26,7 @@ trimData_se: - if [ `nproc` -gt 8 ]; then ncore=8; else ncore=`nproc`; fi - singularity run 'docker://bicf/trimgalore:1.1' trim_galore --gzip -q 25 --illumina --length 35 --basename 16-1ZX4 -j ${ncore} ./test_data/fastq/16-1ZX4.R1.fastq.gz - trimData_pe: +trimData_pe: tage: unit script: - if [ `nproc` -gt 8 ]; then ncore=8; else ncore=`nproc`; fi