From efac9095a0596b443340ff203bf5b14c2e291fe7 Mon Sep 17 00:00:00 2001
From: "Gervaise H. Henry" <gervaise.henry@utsouthwestern.edu>
Date: Thu, 7 Jan 2021 23:08:23 -0600
Subject: [PATCH] Add report, trace, timeline
---
workflow/nextflow.config | 12 ++++++------
1 file changed, 6 insertions(+), 6 deletions(-)
diff --git a/workflow/nextflow.config b/workflow/nextflow.config
index a62f9f5..e28fe79 100644
--- a/workflow/nextflow.config
+++ b/workflow/nextflow.config
@@ -97,19 +97,19 @@ process {
}
trace {
- enabled = false
- file = 'pipeline_trace.txt'
+ enabled = true
+ file = '${params.outDir}/${params.repRID}_trace.txt'
fields = 'task_id,native_id,process,name,status,exit,submit,start,complete,duration,realtime,%cpu,%mem,rss'
}
timeline {
- enabled = false
- file = 'timeline.html'
+ enabled = true
+ file = '${params.outDir}/${param.repRID}_timeline.html'
}
report {
- enabled = false
- file = 'report.html'
+ enabled = true
+ file = '${params.outDir}/${param.repRID}_report.html'
}
tower {
--
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