From ebab7cd7f26371c7df3ec641ae7cbcb543a4fb96 Mon Sep 17 00:00:00 2001
From: "Gervaise H. Henry" <gervaise.henry@utsouthwestern.edu>
Date: Tue, 5 May 2020 19:14:18 -0500
Subject: [PATCH] Change to staging.gudmap.org
---
workflow/rna-seq.nf | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/workflow/rna-seq.nf b/workflow/rna-seq.nf
index 748536d..de8bf96 100644
--- a/workflow/rna-seq.nf
+++ b/workflow/rna-seq.nf
@@ -100,7 +100,7 @@ process getBag {
# deriva-download replicate RID
echo -e "LOG: fetching bagit for ${repRID} in GUDMAP" >> ${repRID}.getBag.log
- deriva-download-cli dev.gudmap.org --catalog 2 ${derivaConfig} . rid=${repRID}
+ deriva-download-cli staging.gudmap.org --catalog 2 ${derivaConfig} . rid=${repRID}
echo -e "LOG: fetched" >> ${repRID}.getBag.log
"""
}
--
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