diff --git a/workflow/scripts/parseMeta.py b/workflow/scripts/parseMeta.py index 6ba068d32f8bffa346cc7f3fb3fa695b08b43272..d2fb8fae73348403032e7509b4a9e67cba30d3b7 100644 --- a/workflow/scripts/parseMeta.py +++ b/workflow/scripts/parseMeta.py @@ -37,9 +37,9 @@ def main(): ends = "uk" print(ends) if (args.parameter == "endsManual"): - if (len(metaFile[metaFile["File_Type"] == "FastQ"].all()) == 1): + if (len(metaFile[metaFile["File_Type"] == "FastQ"]) == 1): endsManual = "se" - elif (len(metaFile[metaFile["File_Type"] == "FastQ"].all()) == 2): + elif (len(metaFile[metaFile["File_Type"] == "FastQ"]) == 2): endsManual = "pe" print(endsManual) if (args.parameter == "stranded"):