diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml index e6dac7c82dad2612a746ff5a4cd1ca652de7911c..ed6baaf0a5706aebe4d80c713fe0791cc62a9989 100644 --- a/.gitlab-ci.yml +++ b/.gitlab-ci.yml @@ -133,18 +133,14 @@ integration_se: - hostname - ulimit -a - nextflow -bg run ./workflow/rna-seq.nf --deriva ./test_data/auth/credential.json --bdbag ./test_data/auth/cookies.txt --repRID 16-1ZX4 -with-dag dag.png --ci true - - find . -type f -name "multiqc_data.json" -exec cp {} . \; + - find . -type f -name "multiqc_data.json" -exec cp {} ./16-1ZX4_multiqc_data.json \; artifacts: name: "$CI_JOB_NAME" when: always paths: - - dag.png - output/qc/ + - 16-1ZX4_multiqc_data.json expire_in: 7 days - cache: - key: se_multiqc_cache - paths: - - multiqc_data.json integration_pe: stage: integration @@ -152,23 +148,18 @@ integration_pe: - hostname - ulimit -a - nextflow -bg run ./workflow/rna-seq.nf --deriva ./test_data/auth/credential.json --bdbag ./test_data/auth/cookies.txt --repRID Q-Y5JA -with-dag dag.png --ci true - - find . -type f -name "multiqc_data.json" -exec cp {} . \; + - find . -type f -name "multiqc_data.json" -exec cp {} ./Q-Y5JA_multiqc_data.json \; artifacts: name: "$CI_JOB_NAME" when: always paths: - dag.png - output/qc/ + - Q-Y5JA_multiqc_data.json expire_in: 7 days - cache: - key: pe_multiqc_cache - paths: - - multiqc_data.json consistency_se: stage: consistency script: - echo "TEST" - cache: - key: se_multiqc_cache