From e5325a564d0ce7669f1efc95361d80d829ec710d Mon Sep 17 00:00:00 2001
From: "Gervaise H. Henry" <gervaise.henry@utsouthwestern.edu>
Date: Mon, 4 Jan 2021 15:14:27 -0600
Subject: [PATCH] Try and fix error finalize execution run
---
workflow/rna-seq.nf | 3 +--
1 file changed, 1 insertion(+), 2 deletions(-)
diff --git a/workflow/rna-seq.nf b/workflow/rna-seq.nf
index df26b7a..31fec91 100644
--- a/workflow/rna-seq.nf
+++ b/workflow/rna-seq.nf
@@ -1883,11 +1883,10 @@ process uploadOutputBag {
}
// Extract output bag RID into channel
-outputBagRID = Channel.create()
+outputBagRID = Channel.of(false)
outputBagRID_fl.splitCsv(sep: ",", header: false).separate(
outputBagRID
)
-outputBagRID.ifEmpty(false)
/*
* finalizeExecutionRun: finalizes the execution run
--
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