diff --git a/workflow/conf/multiqc_config.yaml b/workflow/conf/multiqc_config.yaml
index ac1619e25c015bdd7668547178647489d1f968fb..8a357e3f651aebde2b438341a4cdf4a1822a0832 100644
--- a/workflow/conf/multiqc_config.yaml
+++ b/workflow/conf/multiqc_config.yaml
@@ -57,9 +57,9 @@ report_section_order:
     ref:
       order: 1000
     Software_Versions:
-        order: -1000
+      order: -1000
     Software_References:
-        order: -2000
+      order: -1100
 
 skip_generalstats: true
 
@@ -158,6 +158,6 @@ sp:
     tin:
         fn: '*.tin.hist.tsv'
     Software_Versions:
-      fn: 'software_versions_mqc.yaml'
+        fn: 'software_versions_mqc.yaml'
     Software_References:
-      fn: 'software_references_mqc.yaml'
+        fn: 'software_references_mqc.yaml'