From ddb35f4ec40c7fc518f465dd01576ad8d6244e7d Mon Sep 17 00:00:00 2001
From: "Gervaise H. Henry" <gervaise.henry@utsouthwestern.edu>
Date: Mon, 15 Feb 2021 15:19:09 -0600
Subject: [PATCH] Fix bigwig output name pattern
---
rna-seq.nf | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/rna-seq.nf b/rna-seq.nf
index 53e5a51..7698d47 100644
--- a/rna-seq.nf
+++ b/rna-seq.nf
@@ -1745,7 +1745,7 @@ dedupBam.into {
*/
process makeBigWig {
tag "${repRID}"
- publishDir "${outDir}/bigwig", mode: 'copy', pattern: "${repRID}.bw"
+ publishDir "${outDir}/bigwig", mode: 'copy', pattern: "${repRID}_sorted.deduped.bw"
input:
tuple path (bam), path (bai) from dedupBam_makeBigWig
--
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