diff --git a/docs/software_versions_mqc.yaml b/docs/software_versions_mqc.yaml
index 8f2b97ce7e645b909c93a0ab573752ec24542dcc..ea5487adc7ac4894ff48bae93783a5348a945160 100644
--- a/docs/software_versions_mqc.yaml
+++ b/docs/software_versions_mqc.yaml
@@ -7,18 +7,18 @@
         data: |
             <dl class="dl-horizontal">
         
-            <dt>Python</dt><dd>v3.7.7</dd>
-            <dt>DERIVA</dt><dd>v1.0.0</dd>
+            <dt>Python</dt><dd>v3.8.3</dd>
+            <dt>DERIVA</dt><dd>v1.3.0</dd>
             <dt>BDBag</dt><dd>v1.5.6</dd>
-            <dt>RSeQC</dt><dd>v3.0.1</dd>
-            <dt>Trim Galore!</dt><dd>v0.6.4</dd>
-            <dt>HISAT2</dt><dd>v2.1.0</dd>
-            <dt>Samtools</dt><dd>v1.9</dd>
-            <dt>picard (MarkDuplicates)</dt><dd>v2.23.0-SNAPSHOT</dd>
-            <dt>featureCounts</dt><dd>v2.0.0</dd>
-            <dt>R</dt><dd>v3.6.3</dd>
-            <dt>deepTools</dt><dd>v3.3.2</dd>
+            <dt>RSeQC</dt><dd>v4.0.0</dd>
+            <dt>Trim Galore!</dt><dd>v0.6.4_dev</dd>
+            <dt>HISAT2</dt><dd>v2.2.1</dd>
+            <dt>Samtools</dt><dd>v1.11</dd>
+            <dt>picard (MarkDuplicates)</dt><dd>v2.23.9</dd>
+            <dt>featureCounts</dt><dd>v2.0.1</dd>
+            <dt>R</dt><dd>v4.0.3</dd>
+            <dt>deepTools</dt><dd>v3.5.0</dd>
             <dt>FastQC</dt><dd>v0.11.9</dd>
-            <dt>MultiQC</dt><dd>v1.8</dd>
+            <dt>MultiQC</dt><dd>v1.9</dd>
             <dt>Pipeline Version</dt><dd>v0.0.4_indev</dd>
             </dl>