From d1fd2becb7a3a9415350f2350824f629315ab8f1 Mon Sep 17 00:00:00 2001
From: "Gervaise H. Henry" <gervaise.henry@utsouthwestern.edu>
Date: Tue, 2 Mar 2021 23:12:19 -0600
Subject: [PATCH] Try to fix cache dir
---
.gitlab-ci.yml | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index c27662d..9a2639c 100644
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -2,7 +2,7 @@ before_script:
- module load python/3.6.4-anaconda
- pip install --user attrs==20.3.0 pytest==6.2.2 pytest-pythonpath==0.7.3 pytest-cov==2.11.1
- module load singularity/3.5.3
- - export SINGULARITY_CACHEDIR=${dir}
+ - export SINGULARITY_CACHEDIR=${dir}/cache/
- module load nextflow/20.01.0
- ln -sfn /project/BICF/BICF_Core/shared/gudmap/test_data/* ./test_data/
- mkdir -p ~/.deriva
@@ -15,7 +15,7 @@ variables:
refMoVersion: "38.p6.vM25"
refHuVersion: "38.p13.v36"
refERCCVersion: "92"
- dir: "/project/BICF/BICF_Core/shared/gudmap/singularity_cache/cache"
+ dir: "/project/BICF/BICF_Core/shared/gudmap/singularity_cache/"
stages:
- singularity
--
GitLab