diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml index 13e548d017c3cad1e731c6f7a5295b26c7d87485..4ae188a9e1ede7ca7da3098adeeb3a402d2eddf4 100644 --- a/.gitlab-ci.yml +++ b/.gitlab-ci.yml @@ -489,7 +489,7 @@ uploadQC: done echo all old mRNA QC RIDs deleted fi - rid=$(singularity run ${dir}${derivaImg}_${derivaVar}.sif python3 ./workflow/scripts/upload_qc.py -r 17-BTFJ -e 17-BVDJ -p "Single End" -s forward -l 35 -w 5 -f 1 -t 1 -n "This is a test mRNA QC" -o staging.gudmap.org -c ${cookie} -u F) + rid=$(singularity run ${dir}${derivaImg}_${derivaVar}.sif python3 ./workflow/scripts/upload_qc.py -r ${ci_staging_rid_test_rep} -e ${ci_staging_rid_test_erun} -p "Single End" -s forward -l 35 -w 5 -f 1 -t 1 -n "This is a test mRNA QC" -o staging.gudmap.org -c ${cookie} -u F) echo ${rid} test mRNA QC created uploadProcessedFile: