From c8ce8d741d971d92fc8dcc71874794e27d040cb0 Mon Sep 17 00:00:00 2001
From: "Gervaise H. Henry" <gervaise.henry@utsouthwestern.edu>
Date: Sun, 13 Sep 2020 20:59:38 -0500
Subject: [PATCH] Try each refInfer
---
workflow/rna-seq.nf | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/workflow/rna-seq.nf b/workflow/rna-seq.nf
index 41e11c7..4dcff2b 100644
--- a/workflow/rna-seq.nf
+++ b/workflow/rna-seq.nf
@@ -381,7 +381,7 @@ process getRefInfer {
input:
path credential, stageAs: "credential.json" from deriva_getRefInfer
- val refName from referenceInfer
+ each val refName from referenceInfer
output:
tuple val (refName), path ("hisat2", type: 'dir'), path ("*.fna"), path ("*.gtf") into refInfer
--
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