diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml index 60a094ffe9c0b87258d8776cbcf086fb6a309164..086dafc12410ea34ce9576ec521e4c8f9487f1b1 100644 --- a/.gitlab-ci.yml +++ b/.gitlab-ci.yml @@ -288,7 +288,7 @@ uploadInputBag: script: - ln -sfn `readlink -e ./test_data/auth/credential.json` ./credential.json - > - hatrac=$(singularity run 'docker://gudmaprbk/deriva1.3:1.0.0' deriva-hatrac-cli --host dev.gudmap.org ls /hatrac/resources/rnaseq/pipeline/input_bag/ | grep -o /TESTX$) && + hatrac=$(singularity run 'docker://gudmaprbk/deriva1.3:1.0.0' deriva-hatrac-cli --host dev.gudmap.org ls /hatrac/resources/rnaseq/pipeline/input_bag/ | grep -o /TESTX$) echo ${hatrac} && if [ -z "${hatrac}" ]; then singularity run 'docker://gudmaprbk/deriva1.3:1.0.0' deriva-hatrac-cli --host dev.gudmap.org mkdir /hatrac/resources/rnaseq/pipeline/input_bag/TESTX; fi - echo THIS IS A TEST FILE > test.txt