From c39bba41fbbc2012be4c50518e544f7c60b5c546 Mon Sep 17 00:00:00 2001
From: "Gervaise H. Henry" <gervaise.henry@utsouthwestern.edu>
Date: Thu, 27 Aug 2020 12:04:05 -0500
Subject: [PATCH] Update .gitlab-ci.yml
---
.gitlab-ci.yml | 36 ++++++++++++------------------------
1 file changed, 12 insertions(+), 24 deletions(-)
diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index 40f1ce4..91d45be 100644
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -213,10 +213,8 @@ outputBag:
integration_se:
stage: integration
- only:
- - merge_requests
- except:
- - master
+ only: [merge_requests]
+ except: [/master/]
script:
- hostname
- ulimit -a
@@ -237,10 +235,8 @@ integration_se:
integration_pe:
stage: integration
- only:
- - merge_requests
- except:
- - master
+ only: [merge_requests]
+ except: [/master/]
script:
- hostname
- ulimit -a
@@ -262,10 +258,8 @@ integration_pe:
override_inputBag:
stage: integration
- only:
- - merge_requests
- except:
- - master
+ only: [merge_requests]
+ except: [/master/]
script:
- hostname
- ulimit -a
@@ -284,10 +278,8 @@ override_inputBag:
override_fastq:
stage: integration
- only:
- - merge_requests
- except:
- - master
+ only: [merge_requests]
+ except: [/master/]
script:
- hostname
- ulimit -a
@@ -306,10 +298,8 @@ override_fastq:
override_species:
stage: integration
- only:
- - merge_requests
- except:
- - master
+ only: [merge_requests]
+ except: [/master/]
script:
- hostname
- ulimit -a
@@ -329,10 +319,8 @@ override_species:
consistency:
stage: consistency
- only:
- - merge_requests
- except:
- - master
+ only: [merge_requests]
+ except: [/master/]
script:
- grep -m 1 \"Assigned\":.[0-9] SE_multiqc_data.json | grep -oe '\([0-9.]*\)' > assignedSE.txt
- grep -m 1 \"Assigned\":.[0-9] PE_multiqc_data.json | grep -oe '\([0-9.]*\)' > assignedPE.txt
--
GitLab