diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index 3d0b9f20e3dd8e21b32a8101724e3a60d80bad70..55c6d4a60dedef28ea9389075e8b45051cdb0df8 100644
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -355,16 +355,16 @@ uploadExecutionRun:
   script:
   - ln -sfn `readlink -e ./test_data/auth/credential.json` ./credential.json
   - >
-    exist=$(singularity run 'docker://gudmaprbk/deriva1.3:1.0.0' curl -s https://dev.gudmap.org/ermrest/catalog/2/entity/RNASeq:Execution_Run/Workflow=18-DT5T/Reference_Genome=17-BPD4/Input_Bag=18-MHWC/Replicate=18-MJ3A)
+    exist=$(singularity run 'docker://gudmaprbk/deriva1.3:1.0.0' curl -s https://dev.gudmap.org/ermrest/catalog/2/entity/RNASeq:Execution_Run/Workflow=18-DT5T/Reference_Genome=17-BPD4/Input_Bag=18-MHWC/Replicate=18-MJ3A) &&
     if [ "${exist}" == "[]" ]; then
       cookie=$(cat credential.json | grep -A 1 '\"dev.gudmap.org\": {' | grep -o '\"cookie\": \".*\"') &&
       cookie=${cookie:11:-1} &&
-      rid=$(python3 uploadExecutionRun.py -r 18-MJ3A -w 18-DT5T -g 17-BPD4 -i 18-MHWC -s Error -d 'Run in process' -o dev.gudmap.org -c ${cookie} -u F)
+      rid=$(singularity run 'docker://gudmaprbk/deriva1.3:1.0.0' python3 ./workflow/scripts/uploadExecutionRun.py -r 18-MJ3A -w 18-DT5T -g 17-BPD4 -i 18-MHWC -s Error -d 'Run in process' -o dev.gudmap.org -c ${cookie} -u F) &&
       echo ${rid} test execution run created
     else
-      rid=$(echo ${exist} | grep -o '\\"RID\\":\\".*\\",\\"RCT')
-      rid=${rid:7:-6}
-      rid=$(python3 uploadExecutionRun.py -r 18-MJ3A -w 18-DT5T -g 17-BPD4 -i 18-MHWC -s Error -d 'Run in process' -o dev.gudmap.org -c ${cookie} -u ${rid})
+      rid=$(echo ${exist} | grep -o '\"RID\":\".*\",\"RCT') &&
+      rid=${rid:7:-6} &&
+      rid=$(singularity run 'docker://gudmaprbk/deriva1.3:1.0.0' python3 ./workflow/scripts/uploadExecutionRun.py -r 18-MJ3A -w 18-DT5T -g 17-BPD4 -i 18-MHWC -s Error -d 'Run in process' -o dev.gudmap.org -c ${cookie} -u ${rid})
       echo ${rid} test execution run already exists
     fi