diff --git a/workflow/rna-seq.nf b/workflow/rna-seq.nf index e3690bfcce75dbce98d553648995e023c97af905..555f711ed3abe7a621be3de603c12a7cc56b3c13 100644 --- a/workflow/rna-seq.nf +++ b/workflow/rna-seq.nf @@ -2420,10 +2420,10 @@ process failPreExecutionRun { errorDetails=\$(echo \$(errorDetails)${fastqReadError_details}"\\n") elif [ ${fastqFileError} == true ] then - errorDetails=\$(echo \$(errorDetails)${fastqReadError_details}"\\n") + errorDetails=\$(echo \$(errorDetails)${fastqFileError_details}"\\n") elif [ ${speciesError} == true ] then - errorDetails=\$(echo \$(errorDetails)${fastqReadError_details}"\\n") + errorDetails=\$(echo \$(errorDetails)${speciesError_details}"\\n") fi echo LOG: searching for workflow RID - BICF mRNA ${workflow.manifest.version} >> ${repRID}.failPreExecutionRun.log