diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml index e2b09fef9b82c5c6ca27a684b7ea508ad0e82db2..98744850281c12388d3126fcaffb08898ee5f6be 100644 --- a/.gitlab-ci.yml +++ b/.gitlab-ci.yml @@ -352,7 +352,7 @@ uploadProcessedFile: - ln -sfn `readlink -e ./test_data/auth/credential.json` ./credential.json - echo THIS IS A TEST FILE > 17-BTFJ_test.csv - mkdir -p ./deriva/Seq/pipeline/17-BTFE/17-BTG4/ - - mv 17-BTFJ_test.csv ./deriva/Seq/pipeline/17-BTFA/17-BTG4/17-BTFJ_test.csv + - mv 17-BTFJ_test.csv ./deriva/Seq/pipeline/17-BTFE/17-BTG4/17-BTFJ_test.csv - > exist=$(singularity run 'docker://gudmaprbk/deriva1.3:1.0.0' curl -s https://staging.gudmap.org/ermrest/catalog/2/entity/RNASeq:Processed_File/Replicate=17-BTFJ) && cookie=$(cat credential.json | grep -A 1 '\"staging.gudmap.org\": {' | grep -o '\"cookie\": \".*\"') &&