From b292cceec63b893f7e74cd763b0c6f96f1a0b19b Mon Sep 17 00:00:00 2001
From: "Gervaise H. Henry" <gervaise.henry@utsouthwestern.edu>
Date: Thu, 2 Apr 2020 10:07:55 -0500
Subject: [PATCH] Update rna-seq.nf
---
workflow/rna-seq.nf | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/workflow/rna-seq.nf b/workflow/rna-seq.nf
index 5fa5bd1..86cff32 100644
--- a/workflow/rna-seq.nf
+++ b/workflow/rna-seq.nf
@@ -487,6 +487,6 @@ process inferMetadata {
done | parallel -j `nproc` -k > ${repRID}.sorted.deduped.tin.xls 2>>${repRID}.rseqc.err
# write infered metadata to file
- echo -e \${endness},\${stranded},\${strategy},\${percentF},\${percentR},\${fail} > infer.csv
+ echo \${endness},\${stranded},\${strategy},\${percentF},\${percentR},\${fail} > infer.csv
"""
}
--
GitLab