diff --git a/workflow/rna-seq.nf b/workflow/rna-seq.nf index 9dbb69b73cc80017f3d71f76f801ebdc4aed7323..3a6918b0fa7a06c281dd7393b62c975ebbd3f396 100755 --- a/workflow/rna-seq.nf +++ b/workflow/rna-seq.nf @@ -140,7 +140,7 @@ process parseMetadata { echo "LOG: endedness manually detected: \${endsManual}" >>${repRID}.parseMetadata.err - if [ '\${endsMeta}' == "uk" ] + if [ '\${endsMeta}' == 'uk' ] then ends=\${endsManual} echo "LOG: manual detected endness used" >>${repRID}.parseMetadata.err