diff --git a/workflow/nextflow.config b/workflow/nextflow.config index b166eae18955dcc0ee1955fee0896adfd7465ced..218cf2ae2e6c306be80f1bc0ccfd17da9125e9a8 100644 --- a/workflow/nextflow.config +++ b/workflow/nextflow.config @@ -26,13 +26,13 @@ process { container = 'bicf/gudmaprbkfilexfer:2.0.1_indev' } withName: parseMetadata { - container = 'bicf/python3:2.0.1_indev' + container = 'gudmaprbk/python3:1.0.0' } withName: trimData { container = 'bicf/trimgalore:1.1' } withName: getRefInfer { - container = 'bicf/awscli:1.1' + container = 'gudmaprbk/deriva1.3:1.0.0' } withName: downsampleData { container = 'bicf/seqtk:2.0.1_indev' @@ -44,7 +44,7 @@ process { container = 'bicf/rseqc3.0:2.0.1_indev' } withName: getRef { - container = 'bicf/awscli:1.1' + container = 'gudmaprbk/deriva1.3:1.0.0' } withName: alignData { container = 'bicf/gudmaprbkaligner:2.0.1_indev'