diff --git a/rna-seq.nf b/rna-seq.nf index 35ecf9a1c3e0927da77b69064fc667235a5ccfa1..923eccc878b6ba733bfbfa4cb7493231faf94878 100644 --- a/rna-seq.nf +++ b/rna-seq.nf @@ -906,10 +906,10 @@ process seqwho { # save seqwho multiqc report echo -e "Read\tSeq Type\tSpecies\tConfidence\tSeq Type Confidence\tSeq Type Consensus\tSpecies Confidence" > seqwhoInfer.tsv - echo -e "Read 1\y\${seqtypeR1}\t\${speciesR1}\t\${confidenceR1}\${seqtypeConfidenceR1}\t\${consensus}\t\${speciesConfidenceR1}" >> seqwhoInfer.tsv + echo -e "Read 1\t\${seqtypeR1}\t\${speciesR1}\t\${confidenceR1}\${seqtypeConfidenceR1}\t\${consensus}\t\${speciesConfidenceR1}" >> seqwhoInfer.tsv if [ "${ends}" == "pe" ] then - echo -e "Read 2\y\${seqtypeR2}\t\${speciesR2}\t\${confidenceR2}\${seqtypeConfidenceR2}\t\${consensus}\t\${speciesConfidenceR2}" >> seqwhoInfer.tsv + echo -e "Read 2\t\${seqtypeR2}\t\${speciesR2}\t\${confidenceR2}\${seqtypeConfidenceR2}\t\${consensus}\t\${speciesConfidenceR2}" >> seqwhoInfer.tsv fi