From a6c1385b3adf9be9332d08b82820f4a9ae2ea8a2 Mon Sep 17 00:00:00 2001
From: "Gervaise H. Henry" <gervaise.henry@utsouthwestern.edu>
Date: Tue, 14 Jan 2020 12:03:20 -0600
Subject: [PATCH] Fix biohpc config
---
workflow/conf/biohpc.config | 4 +++-
1 file changed, 3 insertions(+), 1 deletion(-)
diff --git a/workflow/conf/biohpc.config b/workflow/conf/biohpc.config
index adcd15e..0fea2a6 100755
--- a/workflow/conf/biohpc.config
+++ b/workflow/conf/biohpc.config
@@ -4,10 +4,12 @@ process {
clusterOptions = '--hold'
// Process specific configuration
- withName:splitData {
+ withName:getBag {
+ executor = 'local'
container = 'docker://bicf/gudmaprbkfilexfer:1.1'
}
withName:getData {
+ executor = 'local'
container = 'docker://bicf/gudmaprbkfilexfer:1.1'
}
withName:trimData {
--
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