From 9f4b63ed992d81d777ebeb23826750c414bc0e5c Mon Sep 17 00:00:00 2001
From: Jonathan Gesell <jonathan.gesell@utsouthwestern.edu>
Date: Fri, 7 Feb 2020 16:29:04 -0600
Subject: [PATCH] Update .gitlab-ci.yml

---
 .gitlab-ci.yml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index 2327f2e..1c66917 100644
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -72,7 +72,7 @@ dedupData:
 makeBigWig
   stage: unit
   script:
-  - singularity run 'docker://bicf/deeptools3.3:2.0.0' bamCoverage -b ./test_data/bam/small/Q-Y5JA_1M.se.sorted.deduped.bam -o ./test_data/bam/small/Q-Y5JA_1M.se.bw
+  - singularity run 'docker://bicf/deeptools3.3:2.0.0' bamCoverage -p `nproc` -b ./test_data/bam/small/Q-Y5JA_1M.se.sorted.deduped.bam -o ./test_data/bam/small/Q-Y5JA_1M.se.bw
   - pytest -m makeBigWig
 
 fastqc:
-- 
GitLab