From 9b9245dc7046b1addf4bed7004cffc26eca38d67 Mon Sep 17 00:00:00 2001
From: Jeremy Mathews <Jeremy.Mathews@utsouthwestern.edu>
Date: Thu, 19 Nov 2020 15:50:09 -0600
Subject: [PATCH] Fix RID in singularity
---
.gitlab-ci.yml | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index e4beb0e..8ac19f4 100644
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -44,7 +44,7 @@ getData:
- singularity run 'docker://bicf/gudmaprbkfilexfer:2.0.1_indev' bdbag --version > version_bdbag.txt
- ln -sfn `readlink -e ./test_data/auth/cookies.txt` ~/.bdbag/deriva-cookies.txt
- unzip ./test_data/bag/staging/Replicate_Q-Y5JA.zip
- - singularity run 'docker://bicf/gudmaprbkfilexfer:2.0.1_indev' bash ./workflow/scripts/bdbagFetch.sh Replicate_Q-Y5F6 Replicate_Q-Y5F6 TEST
+ - singularity run 'docker://bicf/gudmaprbkfilexfer:2.0.1_indev' bash ./workflow/scripts/bdbagFetch.sh Replicate_Q-Y5JA Replicate_Q-Y5JA TEST
- pytest -m getData
artifacts:
name: "$CI_JOB_NAME"
--
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