From 98cf06b5eec4bff4e9d3820465b1a3d577cfdc8e Mon Sep 17 00:00:00 2001
From: "Gervaise H. Henry" <gervaise.henry@utsouthwestern.edu>
Date: Tue, 14 Jul 2020 17:20:49 -0500
Subject: [PATCH] Update nextflow and singularity versions in CI

---
 .gitlab-ci.yml | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index 4be9f97..a4e74a3 100644
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -1,8 +1,8 @@
 before_script:
   - module add  python/3.6.4-anaconda
   - pip install --user pytest-pythonpath==0.7.1 pytest-cov==2.5.1
-  - module load singularity/3.0.2
-  - module load nextflow/19.09.0
+  - module load singularity/3.5.3
+  - module load nextflow/20.01.0
   - ln -sfn /project/BICF/BICF_Core/shared/gudmap/test_data/* ./test_data/
   - mkdir -p ~/.deriva
   - mkdir -p ~/.bdbag
-- 
GitLab